Update nokogiri and google-protobuf for Ruby 3.3

Gemfile.lock

@@ -358,11 +358,7 @@ GEM
       googleauth (~> 0.9)
       grpc (~> 1.24)
       rly (~> 0.2.3)
-    google-protobuf (3.23.1)
-    google-protobuf (3.23.1-aarch64-linux)
-    google-protobuf (3.23.1-arm64-darwin)
-    google-protobuf (3.23.1-x86_64-darwin)
-    google-protobuf (3.23.1-x86_64-linux)
+    google-protobuf (3.25.1)
     googleapis-common-protos (1.4.0)
       google-protobuf (~> 3.14)
       googleapis-common-protos-types (~> 1.2)
@@ -376,14 +372,8 @@ GEM
       multi_json (~> 1.11)
       os (>= 0.9, < 2.0)
       signet (~> 0.15)
-    grpc (1.55.0)
-      google-protobuf (~> 3.23)
-      googleapis-common-protos-types (~> 1.0)
-    grpc (1.55.0-x86_64-darwin)
-      google-protobuf (~> 3.23)
-      googleapis-common-protos-types (~> 1.0)
-    grpc (1.55.0-x86_64-linux)
-      google-protobuf (~> 3.23)
+    grpc (1.60.0)
+      google-protobuf (~> 3.25)
       googleapis-common-protos-types (~> 1.0)
     guard (2.18.0)
       formatador (>= 0.2.4)
@@ -498,7 +488,7 @@ GEM
       rake
     mini_magick (4.12.0)
     mini_mime (1.1.2)
-    mini_portile2 (2.8.2)
+    mini_portile2 (2.8.5)
     mini_racer (0.6.3)
       libv8-node (~> 16.10.0.0)
     minitest (5.18.0)
@@ -528,16 +518,16 @@ GEM
     net-ssh (7.1.0)
     netrc (0.11.0)
     nio4r (2.5.9)
-    nokogiri (1.15.2)
+    nokogiri (1.16.0)
       mini_portile2 (~> 2.8.2)
       racc (~> 1.4)
-    nokogiri (1.15.2-aarch64-linux)
+    nokogiri (1.16.0-aarch64-linux)
       racc (~> 1.4)
-    nokogiri (1.15.2-arm64-darwin)
+    nokogiri (1.16.0-arm64-darwin)
       racc (~> 1.4)
-    nokogiri (1.15.2-x86_64-darwin)
+    nokogiri (1.16.0-x86_64-darwin)
       racc (~> 1.4)
-    nokogiri (1.15.2-x86_64-linux)
+    nokogiri (1.16.0-x86_64-linux)
       racc (~> 1.4)
     notiffany (0.1.3)
       nenv (~> 0.1)
@@ -597,7 +587,7 @@ GEM
     puma (6.2.2)
       nio4r (~> 2.0)
     raabro (1.4.0)
-    racc (1.6.2)
+    racc (1.7.3)
     rack (2.2.7)
     rack-livereload (0.5.1)
       rack